杉山班

*Taki,Y.,Nakagawa,T.,Isoda,H. 木造住宅のロッキング挙動による地震時入力低減に関する解析的検討, 日本木材学会大会, H14-08

澤班

Suetsugu K., Nishioka, T., Kaida, S., Hsu T-C., Sawa, S., and Kato M. (2018) A new variety of the mycoheterotrophic orchid Lecanorchis thalassica from Xieng Khouang Province, Laos. Taiwaniana. 63, 351-355.

Qian, P., Song, W., Yokoo, T., Minobe, A., Wang, G., Ishida, T., Sawa, S., Chai, J., and Kakimoto, T. (2018) The CLE9/10 secretory peptide regulates stomatal and vascular development through distinct receptors. Nature Plants. 4. 1071-1081. (IF: 11.47)

Furumizu, C., Hirakawa, Y., Bowman, J. L., and *Sawa, S. (2018) 3D Body Evolution: Adding a New Dimension to Colonize the Land. Curr. Biol. 28, R838-840. (IF: 9.25)

Shin C.L., Wangenheim, D. Herrmann, U., Wildhagen, M., Kulik, I., Kopf, A., Ishida, T., Olsson, V., Anker, M. K., Albert, M., Butenko, M., Felix, G., Sawa, S., Claassen, M., Friml, J., and Aalen, R. B. (2018) The dynamics of root cap sloughing in Arabidopsis is regulated by peptide signaling. Nature Plants, 4. 596-604. (IF: 11.47)

Suetsugu K., Fukunaga H., and Sawa S. (2018) Epitypification of Gastrodia pubilabiata (Gastrodieae, Epidendroideae, Orchidaceae). Phytotaxa. 347, 193-196.

Hayashi N., Tstsumura T., Sawa S., Wada T., and Tominaga R. CEL14 peptide signaling in Arabidopsis root hair cell fate determination. (2018) Plant Biotechnology. 35.17-22. (IF: 0.54)

Suetsugu K., Shimaoka C., and Sawa S. (2018) The taxonomic identity of three varieties of Lecanorchis nigricans (Vanilleae, Vanilloideae, Orchidaceae) in Japan. PhytoKeys 92. 17-35.(IF: 1.27)

Yang Y, Tang RJ, Mu B, Ferjani A, Shi J, Zhang H, Zhao F, Lan WZ, Luan S (2018) Vacuolar Proton Pyrophosphatase Is Required for High Magnesium Tolerance in Arabidopsis. International Journal of Molecular Sciences. 19(11). pii: E3617

Ferjani A, Kawade K, Asaoka M, Oikawa A, Okada T, Mochizuki A, Maeshima M, Hirai YM, Saito K, Tsukaya H (2018) Pyrophosphate inhibits gluconeogenesis by restricting UDP-glucose formation in vivo. Scientific Reports. 8:14696.

Graus D, Konrad KR, Bemm F, Nebioglu MGP, Lorey C, Duscha K, Güthoff T, Herrmann J, Ferjani A, Cuin TA, Roelfsema MRG, Schumacher K, Neuhaus HE, Marten I, Hedrich R (2018) High V-PPase activity is beneficial under high salt loads, but detrimental without salinity. New Phytologist. 219:1421-1432.

Segami S, Tomoyama T, Sakamoto S, Gunji S, Fukuda M, Kinoshita S, Mitsuda N, Ferjani A, Maeshima M (2018) Vacuolar H+-pyrophosphatase and cytosolic soluble pyrophosphatases cooperatively regulate pyrophosphate levels in Arabidopsis thaliana. Plant Cell. 30:1040-1061.

Hanchi M, Thibaud MC, Légeret B, Kuwata K, Pochon N, Beisson F, Cao A, Cuyas L, David P, Doerner P, Ferjani A, Lai F, Li-Beisson Y, Mutterer J, Philibert M, Raghothama KG, Rivasseau C, Secco D, Whelan J, Nussaume L, Javot H (2018) The phosphate fast-responsive genes PECP1 and PPsPase1 affect phosphocholine and phosphoethanolamine content. Plant Physiology. 176:2943-2962.

Yoshida, Y., Sarmiento-Mañús, R., Yamori, W., Ponce, M.R., Micol, J.L., *Tsukaya, H. (2018) The Arabidopsis phyB-9 mutant has a second-site mutation in the VENOSA4 gene that alters chloroplast size, photosynthetic traits, and leaf growth. Plant Physiology 178: 3-6.

Guo, Q., Yoshida, Y., Major, I.T., Wang, K., Sugimoto, K., Kapali, G., Havko, N.E., Benning, C., *Howe, G.A. (2018) JAZ repressors of metabolic defense promote growth and reproductive fitness in Arabidopsis. Proceedings of the National Academy of Sciences U.S.A. 115: E10768-E10777.

川口班

有本清香, 川口健一. (2018)　応力密度法の根系形態への適用と支持構造物への応用に関する基礎的考察．日本建築学会大会学術講演梗概集（構造I）. 937-938．

森田班

Kimata, E., Kato, T., Higaki, T., Kurihara, D., Yamada, T., Segami, S., Morita, M.T., Maeshima, M., Hasezawa, S., Higashiyama, T., Tasaka, M., *Ueda, M. (2019) Polar vacuolar distribution is essential for accurate asymmetric division of Arabidopsis zygotes. PNAS 116:2338-2343.

出村班

*Nakano, T., Tanaka, S., Ohtani, M., Yamagami, A., Takeno, S., Hara, N., Mori, A., Nakano, A., Hirose, S., Himuro, Y., Kobayashi, M., Kushiro, T., Demura, T., Asami, T., Osada, H., Shinozaki, K. (2018) FPX is a novel chemical inducer that promotes callus formation and shoot regeneration in plants, Plant Cell Physiol. 59: 1555–1567

Tabara, M., Ohtani, M., Kanekatsu, M., Moriyama, H., *Fukuhara, T. (2018) Size distribution of small interfering RNAs in various organs at different developmental stages is primarily determined by the dicing activity of Dicer-like proteins in plants, Plant Cell Physiol. 59: 2228-2238

*Numata, K., Horii, Y., Oikawa, K., Miyagi, Y., Demura, T., Ohtani, M. (2018) Library screening of cell-penetrating peptide for BY-2 cells, leaves of Arabidopsis, tobacco, tomato, poplar, and rice callus. Sci. Rep. 8: 10966

Takenaka, Y., Watanabe, Y., Schuetz, M., Unda, F., Hill, Jr. J.L., Phookaew, P., Yoneda, Y., Mansfield, S.D., Samuels, L., *Ohtani, M., *Demura, T. (2018) Patterned deposition of xylan and lignin is independent from that of the secondary wall cellulose of Arabidopsis xylem vessels. Plant Cell 30: 2663-2676

Saelim, L., Akiyoshi, N., Tan, T.T., Ihara, A., Yamaguchi, M., Hirano, K., Matsuoka, M., *Demura, T., *Ohtani, M. (2018) Arabidopsis Group IIId ERF proteins positively regulate primary cell wall-type CESA genes. J. Plant Res. 132: 117-129

Mutuku, J.M., Cui, S., Hori, C., Takeda, Y., Tobimatsu, Y., Nakabayashi, R., Mori, T., Saito, K., Demura, T., Umezawa, T., Yoshida, S., *Shirasu, K. (2019) The Structural Integrity of Lignin Is Crucial for Resistance against Striga hermonthica Parasitism in Rice. Plant Physiol. 179: 1796-1809

Ohtani, M., *Demura, T. (2019) The quest for transcriptional hubs of lignin biosynthesis: beyond the NAC-MYB-gene regulatory network model. Curr. Opin. Biotech. 56: 82-87

Tan, T.T., Demura, T., *Ohtani, M. (2019) Creating vessel elements in vitro: towards a comprehensive understanding of the molecular basis of xylem vessel element differentiation. Plant Biotechnol. 36: 1-6

*Kuroha, T., Nagai, K., Gamuyao, R., Wang, D.R., Furuta, T., Nakamori, M., Kitaoka, T., Adachi, K., Minami, A., Mori,Y., Mashiguchi, K., Seto, Y., Yamaguchi, S., Kojima, M., Sakakibara, H., Wu, J., Ebana, K., Mitsuda, N., Ohme-Takagi, M., Yanagisawa, S., Yamasaki, S., Yokoyama, R., Nishitani, K., Mochizuki, T., Tamiya, G., *McCouch, S.R, *Ashikari, M. (2018) An ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding. Science 361: 181-186

Takenaka, Y., Kato, K., Ogawa-Ohnishi, M., Tsuruhama, K., Kajiura, H., Yagyu, K., Takeda, A., Takeda, Y., Kunieda, T., Hara-Nishimura, I., Kuroha, T., Nishitani, K., Matsubayashi, Y., *Ishimizu, T. (2018) Pectin RG-I rhamnosyltransferases represent a novel plant-specific glycosyltransferase family. Nat. Plants 4: 669-676 

Yamaguchi, N., Jiangbo, H., Tatsumi, Y., Abe, M., Sugano, S., Kojima, M., Takebayashi, Y., Kiba, T., Yokoyama, R., Nishitani, K., Sakakibara, H., *Ito, T. (2018) Chromatin-mediated feed-forward auxin biosynthesis in floral meristem determinacy. Nat. Commun. 9: 5290

豊田班

*Toyota, M., Spencer, D., Sawai-Toyota, S., Wang, J., Zhang, T., Koo, AJ., Howe, GA., *Gilroy, S. (2018) Glutamate triggers long-distance, calcium-based plant defense signaling. Science 361:1112-1115.

Toyota, M., Furuichi, T., *Iida, H. (2018) Molecular mechanisms of mechanosensing and mechanotransduction. Plant Biomechanics In: Geitmann A., Gril J. (eds) 375-397.

豊田正嗣 植物が傷つけられたことを全身へ伝えるしくみを解明！. (2018) 月刊「化学」 73:73.

豊田正嗣 グルタミン酸とカルシウムシグナルを介した傷害応答. (2018) 植物の生長調節 53:146-151.

豊田正嗣  植物の全身カルシウムイメージング. (2019) アグリバイオ 3:23-27.

豊田正嗣 植物におけるカルシウム／グルタミン酸のリアルタイムイメージング. (2019) バイオサイエンスとインダストリー 77:110-111.

豊田正嗣 グルタミン酸はカルシウムシグナルを介して植物の全身性傷害防御を引き起こす. (2019) バイオサイエンスとインダストリー 77:134-135.

檜垣班

Hirakawa, Y., Hasezawa, S., *Higaki, T. (2018) Reactive oxygen species production and stimulated endocytosis in tobacco BY-2 cells treated with Erwinia carotovora culture filtrate. Cytologia 83: 289-293.

Akita, K., Hasezawa, S., *Higaki, T. (2018) Cortical microtubules and fusicoccin response in clustered stomatal guard cells induced by sucrose solution immersion. Plant Sig Behav 13: 1454815.

Takatsuka, H., Higaki, T., *Umeda, M. (2018) Actin reorganization triggers rapid cell elongation in Arabidopsis roots. Plant Physiol 178: 1130-1141.

Hirano, T., Konno, H., Takeda, S., Dolan, L., Kato, M., Aoyama, T., Higaki, T., Takigawa-Imamura, H., *Sato, M. H. (2018) PtdIns(3,5)P2 mediates root hair shank hardening in Arabidopsis. Nature Plants 4: 888-897.

Yi-Lun Tsai, A., Higaki, T., Nguyen, C. N., Perfus-Barbeoch, L., Favery, B., *Sawa, S. (2018) Regulation of root-knot nematode behavior by seed coat mucilage-derived attractants. Mol Plant 12: 99-112.

Miyoshi, S., Kimura, S., Ootsuki, R., Higaki, T., *Nakamasu, A. (2019) Developmental analyses of divarications in leaves of an aquatic fern Microsorum pteropus and its varieties. PLOS One 14: e0210141.

Kimata, Y., Kato, T., Higaki, T., Kurihara, D., Yamada, T., Segami, S., Morita, M. T., Maeshima, M., Hasezawa, S., Higashiyama, T., Tasaka, M., *Ueda, M. (2019) Polar vacuolar distribution is essential for accurate asymmetric division of Arabidopsis zygotes. Proc Natl Acad Sci U S A 116: 2338-2343.

Akita, K., *Higaki, T. (2019) An induction system for clustered stomata by sugar solution immersion treatment in Arabidopsis thaliana seedlings. J Vis Exp 144: e58951.

Nagashima, A., Higaki, T., Koeduka, T., Ishigami, K., Hosokawa, S., Watanabe, H., Matsui, K., Hasezawa, S., *Touhara, K. (2019) Transcriptional regulators involved in responses to volatile organic compounds in plants. J Biol Chem 294: 2256-2266.

Tanaka, M., Fujii, Y., Hirano, K., Higaki, T., Nagasaki, A., Ishikawa, R., Okajima, T., *Katoh, K. (2019) Fascin in lamellipodia contributes to cell elasticity by controlling the orientation of filamentous actin. Genes Cells 24: 202-213.

五十嵐班

*Ezaki, T., Nishinari, K., Samejima, M., *Igarashi, K. Bridging the micro-macro gap between single-molecular behavior and bulk hydrolysis properties of cellulose. Phys. Rev. Lett. 122: 098102.

Sakuragi, K., Hori,C., Igarashi, K., *Samejima, M. Secretome analysis of the basidiomycete Phanerochaete chrysosporium grown on ammonia-treated lignocellulosic biomass from birch wood. J. Wood Sci. 64. 845-853.

Kumakura, K., Hori, C., Matsuoka, H., Igarashi, K., and *Samejima, M. Protein components of water extracts from fruiting bodies of the Reishi mushroom Ganoderma lucidum contribute to the production of functional molecules. J. Sci. Food Agric. 99: 529-535.

Abe, K., Sunagawa, N., Terada, T., Takahashi, Y., Arakawa, T., Igarashi, K., Samejima, M., Nakai, H., Taguchi, H., Nakajima, M., and *Fushinobu, S. Structural and thermodynamic insights into β-1, 2-glucooligosaccharide capture by a solute-binding protein in Listeria innocua. J. Biol. Chem. 293: 8812-8828.

Sakuragi, K., Igarashi, K., *Samejima, M. Application of ammonia pretreatment to enable enzymatic hydrolysis of hardwood biomass. Polymer Degrad. Stabil. 148: 19-25.

Kato, S., Hayashi, M., Kitagawa, M., Kajiura, H., Maeda, M., Kimura, Y., Igarashi, K., Kasahara, M. and *Ishimizu, T. Degradation pathway of plant complex-type N-glycans: identification and characterization of a key α1, 3-fucosidase from glycoside hydrolase family 29. Biochem. J. 475: 305-317.

Sakuta, R., Takeda, K., Igarashi, K., Ohno, H., *Nakamura, N. Enzymes suitable for biorefinery to coproduce hexaric acids and electricity from hexuronic acids derived from biomass. Energy Technol. 6: 273-279.

Takeda, K., Umezawa, K., Várnai, A., Eijsink, V., *Igarashi, K., *Yoshida, M., *Nakamura, N. Fungal PQQ-dependent dehydrogenases and their potential in biocatalysis. Curr. Opnion Chem. Biol. 49: 113-121.

The CAZypedia Consortium (著者一覧は論文内Aknowledgement欄に記載). Ten years of CAZypedia: a living encyclopedia of carbohydrate-active enzymes. Glycobiology. 28: 3-8.

五十嵐圭日子、立岡美夏子. セルラーゼの中性子構造解析で明らかにするタンパク質における互変異の重要性. 放射光. 32: in press.

藤島 義之、五十嵐圭日子. ヨーロッパのバイオエコノミーはどこから来たのか？アグリバイオ. 3.

五十嵐圭日子. バイオエコノミートランスフォーメーション 持続可能社会を真に実現するためのアプローチ. バイオプラジャーナル. 70: 10-14.

五十嵐圭日子. バイオマスを利用して地球を守る. 横河技報. 61: 33-34.

五十嵐圭日子. 中性子で解き直し. 四季. 41: 1.

小竹班

Sato, K., Hara, K., Yoshimi, K., Kitazawa, K., Ito, H., Tsumuraya, Y., Kotake, T. (2018) Yariv reactivity of type II arabinogalactan from larch wood. Carbohydr. Res. 467: 8-13.

Yu L., Lyczakowski J.J., Pereira C.S., Kotake T., Yu X., Li A., Møgelsvang S., Skaf M.S., Dupree P. (2018) The patterned structure of galactoglucomannan suggests it may bind to cellulose in seed mucilage. Plant Physiol. 178: 1011-1026

Fujita, K., Sakamoto, A., Kaneko, S., Kotake, T., Tsumuraya, Y., Kitahara, K. (2019) Degradative enzymes for type II arabinogalactan side chains in Bifidobacterium longum subsp. longum. Appl. Microbiol. Biotechnol. 103: 1299-1310.

Rhaman, M.Z., Tsujimori, Y., Maeda, M., Hossain, M.A., Ishimizu, T., *Kimura, Y. (2018) Molecular characterization of second tomato α1,3/4-fucosidase (α-Fuc'ase Sl-2), a member of glycosyl hydrolase family 29 active toward the core α1,3-fucosyl residue in plant N-glycans. J. Biochem. 164: 53-63.

Takenaka, Y., Kato, K., Ogawa-Ohnishi M., Tsuruhama, K., Kajiura, H., Yagyu, K., Takeda, A., Takeda, Y., Kunieda, T., Hara-Nishimura, I., Kuroha, T., Nishitani, K., Matsubayashi, Y., and Ishimizu, T. (2018) Pectin RG-I rhamnosyltransferases represent a novel plant-specific glycosyltransferase family. Nat. Plants 4: 669-676.

竹中悠人、梶浦裕之、石水毅 (2018) 植物細胞壁多糖の生合成　新規ペクチン生合成号転移酵素の発見と今後の展望．化学と生物 57: 88-94.

上田班

*Shimada, T., Kunieda, T., Sumi, S., Koumoto, Y., Tamura, K., Hatano, K., Ueda, H., Hara-Nishimura, I. The AP-1 complex is required for proper mucilage formation in Arabidopsis seeds. (2018) Plant Cell Physiol. 59, 2331-2338.

Yoshinari, A., Hosokawa, T., Amano, T., Beier, M.P., Kunieda, T., Shimada, T., Hara-Nishimura, I., Naito, S., *Takano, J. (2019) Polar localization of the borate exporter BOR1 requires AP2-dependent endocytosis. Plant Physiol. 179:1569-1580.

Nakazaki, A., Yamada, K., Kunieda, T., Sugiyama, R., Hirai, M.Y., Tamura, K., Hara-Nishimura, I., *Shimada, T. Leaf ER bodies identified in Arabidopsis rosette leaves are involved in defense against herbivory. (2019) Plant Physiol. 179:1515-1524.

Ueda, H., *Hara-Nishimura, I. (2019) How to Investigate the Role of the Actin- Myosin Cytoskeleton in Organ Straightening. Methods Mol. Biol. 1924, 215-221.

Takagi, J., *Uemura, T. (2018) Use of brefeldin A and wortmannin to dissect post-Golgi organelles related to vacuolar transport in Arabidopsis thaliana. Methods in Molecular Biology 1789:155-165

Toyota, M., Furuichi, T., *Iida, H. (2018) Molecular mechanism of mechanosensing and mechanotransduction. In Plant Biomechanics. (Eds) A. Geitmann and J. Gril, Springer Press. 357-397.