出村班
Ishida T, Suzuki R, Nakagami S, Kuroha T, Sakamoto S, Nakata MT, Yokoyama R, Kumura S, Mitsuda N, Nishitani K, Sawa S (2020) Root-knot nematodes modulate cell walls during root-knot formation in Arabidopsis roots. J Plant Res 133: 419-428 https://doi.org/10.1007/s10265-020-01186-z
Hori C, Yu X, Mortimer JC, Sano R, Matsumoto T, Kikuchi J, Demura T, Ohtani M (2020) Impact of abiotic stress on the regulation of cell wall biosynthesis in Populus trichocarpa. Plant Biotechnol 37: 273–283
Rukmana TI, Moran G, Méallet-Renault R, Clavier G, Kunieda T, Ohtani M, Demura T, Yasukuni R, Hosokawa Y (2020) Photoinjection of Fluorescent Nanoparticles into Intact Plant Cells Using Femtosecond Laser Amplifier. APL Photonics 5: 066104
Yoneda A, Ohtani M, Katagiri D, Hosokawa Y, *Demura T (2020) Hechtian strands transmit cell wall integrity signals in plant cells. Plants 9: 604
Pawittra P, Suzuki T, Kawabe H, Takebayashi A, Demura T, Ohtani M (2020) Isolation of dominant Arabidopsis seiv mutants defective in VND7-induced xylem vessel cell differentiation. Plant Biotechnol 37: 311-318
Zhu M, Chen W, Mirabet V, Hong L, Bovio S, Strauss S, Schwarz EM, Tsugawa S, Wang Z, Smith RS, Li C-B, Hamant O, Boudaoud A, Roeder AHK (2020) Robust organ size requires robust timing of initiation orchestrated by focused auxin and cytokinin signalling. Nature Plants 6: 686-698
川口健一, 出村拓 (2020) なぜ今、植物学と建築学が協働するのか? 建築雑誌 135: 6(査読無)
有本清香, 川口健一, 中楚洋介, 檜垣匠, 出村拓, 堀口翔太 (2020) 植物の葉表皮細胞のジグソーパターンの木造継ぎ手への直接的応用に関する基礎的研究. 生産研究 Vol.72 No.3(掲載決定)
川口健一. 中楚洋介, 出村拓 (2020) 植物構造オプト:植物の力学的最適化戦略に基づくサステナブル構造システムの基盤創成と力学的アナロジーに学ぶ巨大建築構造システム設計に関する基礎的考察.日本建築学会大会学術講演梗概集(構造I)「オーガナイズドセッション:植物構造オプト」. 4pp. (掲載決定)(選抜梗概)
有本清香, 川口健一, 中楚洋介, 出村拓 (2020) 植物の重力屈性挙動の観察と力学的特性に関する基礎的考察 その2:豆苗の重力屈性挙動における力学的特性.日本建築学会大会学術講演梗概集(構造I)「オーガナイズドセッション:植物構造オプト」. 4pp. (掲載決定)(選抜梗概)
小御門真伍, 川口健一, 中楚洋介, 細見亮太, 石塚広一, 張天昊, 出村拓 (2020) 植物の力学的最適化戦略に学ぶサステナブル建築構造システムにおける巨大建築設計手法の導出と数値解析 その2分裂する細胞とプリミティブな成長ルールが生成する成長パターンの簡単な解析 .日本建築学会大会学術講演梗概集(構造I)「オーガナイズドセッション:植物構造オプト」. 4pp. (掲載決定)(選抜梗概)
堀口翔太, 川口健一, 有本清香, 中楚洋介, 桧垣匠, 出村拓 (2020) 植物の葉細胞にみられるジグソーパターンの継ぎ手への直接的応用と在来継ぎ手形状との比較. 日本建築学会大会学術講演梗概集(構造I). 2pp. (掲載決定)
René Schneider, Kris van’t Klooster, Kelsey L. Picard, Jasper van der Gucht, Taku Demura, Marcel Janson, Arun Sampathkumar, *Eva E. Deinum, *Tijs Ketelaar and *Staffan Persson. (2021) Long-term single-cell imaging and simulations of microtubules reveal principles behind wall patterning during proto-xylem development. Nat. Commun. 12(1):669.
*Ryusuke Nakai, Takashi Azuma, Yosuke Nakaso, Shinichiro Sawa, Taku Demura. (2020) Development of a dynamic imaging method for gravitropism in pea sprouts using clinical magnetic resonance imaging system. Plant Biotechnology 37(4) 437-442.
Taufiq Indra Rukmana, Ryohei Yasukuni, Gabriela Moran, Rachel Méallet-Renault, Gilles Clavier, Tadashi Kunieda, Misato Ohtani, Taku Demura and *Yoichiroh Hosokawa (2020) Direct observation of nanoparticle diffusion in cytoplasm of single plant cells realized by photoinjection with femtosecond laser amplifier. Applied Physics Express 13: 117002.
Ueno D, Mikami M, Yamasaki S, Kaneko M, Mukuta T, Demura T, Kato K. (2020) Changes in mRNA degradation efficiencies under varying conditions are regulated by multiple determinants in Arabidopsis thaliana. Plant Cell Physiol. pcaa147.
*Roumeli, E., Ginsberg, L., McDonald, R., Spigolon, G., Hendrickx, R., Ohtani, M., Demura, T., Ravichandran, G., Daraio, C. (2020) Structure and biomechanics during xylem vessel transdifferentiation in Arabidopsis thaliana. Plants 9: 1715.
Ramachandran, V., Tobimatsu, Y., Yamamura, M., Sano, R., Umezawa, T., *Demura, T., *Ohtani, M. (2020) Plant-specific Dof transcription factors VASCULAR-RELATED DOF1 and VASCULAR-RELATED DOF2 regulate vascular cell differentiation and lignin biosynthesis in Arabidopsis. Plant Mol Biol 104: 263-281
Akita, E., Yalikun, Y., Okano, K., Yamasaki, Y., Ohtani, M., Tanaka, Y., Demura, T., *Hosokawa, Y. (2020) In situ measurement of cell stiffness of Arabidopsis roots growing on a glass micropillar support by atomic force microscopy. Plant Biotechnol 37, 417-422.
*Tsugawa, S., Kanda, N., Nakamura, M., Goh, T., Ohtani, M., *Demura, T. (2020) Spatio-temporal kinematic analysis of shoot gravitropism in Arabidopsis thaliana. Plant Biotechol 37, 443-450.
Miyuki T Nakata, Mao Nakao, Asuka Denda, Yusuke Onoda, Haruko Ueda, *Taku Demura. (2020) Estimating the flexural rigidity of Arabidopsis inflorescence stems: Free-vibration test vs. three-point bending test. Plant Biotechnology 37(4): 471-474.
Kunieda, T., Kishida, K., Kawamura, J., *Demura, T. (2020) Influence of osmotic condition on secondary cell wall formation of xylem vessel cells induced by the master transcription factor VND7. Plant Biotechnology 37: 465-469.
Satoru Tsugawa, Taku Demura, Ryota Hosomi, Shingo Komikado. (2020) Tree bending analysis and its applicability to architectural objects based on the axiom of uniform stress. 建築学会オーガナイズドセッション・構造部門「植物構造オプト」
*Satoru Tsugawa, Tomohiko G Sano, Hiroyuki Shima, Miyo Terao Morita, Taku Demura. (2020) A mathematical model explores the contributions of bending and stretching forces to shoot gravitropism in Arabidopsis. Quant. Plant Biol.
Beier Marcel, Satoru Tsugawa, Taku Demura, and *Toru Fujiwara. (2020) Root shape adaptation to mechanical stress derived from unidirectional vibrations in Populus nigra. Plant Biotech. 37: 423-428.
*Akira Watanabe, Ashiqur Rahman, Kazuhiko Nishitani, Rie Yamada, Mariko Takahashi, Satoru Tsugawa, Taku Demura. (2020) Laser micromarking technique in studying the negative gravitropism in pea stem. Plant Biotech. 37: 485-488.
Ohara, T., Takeuchi, H., Sato, J., Nakamura, A., Ichikawa, H., Yokoyama, R., Nishitani, K., Minami, E., Satoh, S., *Iwai, H., (in press) Structural alternation of rice pectin affects cell wall mechanical strength and pathogenicity for the rice blast fungus under weak light conditions. Plant Cell Physiol.
Hideki Narukawa, Ryusuke Yokoyama, Takeshi Kuroha, *Kazuhiko Nishitani (in press) Host-produced ethylene is required for marked cell expansion and endoreduplication in dodder search hyphae. Plant Physiology
*Daisuke Takahashi, Kim L Johnson, Pengfei Hao, Tan Tuong, Alexander Erban, Arun Sampathkumar, Antony Bacic, David P Livingston III, Joachim Kopka, Takeshi Kuroha,
Ryusuke Yokoyama, Kazuhiko Nishitani, *Ellen Zuther, Dirk K Hincha (2020) Cell wall modification by the xyloglucan endotransglucosylase/hydrolase XTH19 influences freezing tolerance after cold and sub‐zero acclimation. Plant, Cell & Environment
Bussarin Wachananawat, Takeshi Kuroha, Yuto Takenaka, Hiroyuki Kajiura, Satoshi Naramoto, Ryusuke Yokoyama, Kimitsune Ishizaki, Kazuhiko Nishitani, *Takeshi Ishimizu (2020) Diversity of pectin rhamnogalacturonan I rhamnosyltransferases in glycosyltransferase family 106. Frontiers in Plant Science 11, 997
Hiroaki Kuki, Ryusuke Yokoyama, Takeshi Kuroha, *Kazuhiko Nishitani (2020) Xyloglucan is not essential for the formation and integrity of the cellulose network in the primary cell wall regenerated from Arabidopsis protoplasts. Plants 9, 629
*Takashi Ishida, Reira Suzuki, Satoru Nakagami, Takeshi Kuroha, Shingo Sakamoto, Miyuki T Nakata, Ryusuke Yokoyama, Seisuke Kimura, Nobutaka Mitsuda, Kazuhiko Nishitani, Shinichiro Sawa. (2020) Koot-knot nematodes modulate cell walls during root-knot formation in Arabidopsis roots. Journal of plant research 133, 419-428
*Noi Takahashi and Satoru Tsugawa. (2020) Role of Unstable Periodic Orbits in Bubbling Weak Generalized Synchronization. Physica D, 132678.
Leia Colin, Antoine Chevallier, Satoru Tsugawa, Virgile Viasnoff, Timothy E. Saunders, *Olivier Hamant. (2020) Cortical tension overrides geometrical cues to orient microtubules in confined protoplasts. PNAS 117(51): 32731-32738.
杉山班
Hwang S-W, Kobayashi K, *Sugiyama J (2020) Detection and visualization of encoded local features as anatomical predictors in cross-sectional images of Lauraceae. J Wood Sci 66: 16
Nakajima T, Kobayashi K, *Sugiyama J (2020) Anatomical traits of Cryptomeria japonica tree rings studied by wavelet convolutional neural network. IOP Conf. Series: Earth and Environmental Science 415: 012027
Hwang S-W, Kobayashi K, *Sugiyama J (2020) Evaluation of a model using local features and a codebook for wood identification. IOP Conf. Series: Earth and Environmental
Science 415: 012029
Huang Y, Meng S, Hwang S-W, Kobayashi K, Sugiyama J (2020) Neural network for classification of Chinese zither panel wood via near-infrared spectroscopy. BioRes
15: 130-141
Kita Y, Mizuno-Tazuru S, Sugiyama J (2020) Two-dimensional microfibril angle mapping via polarization microscopy for wood classification. IOP Conf. Series: Earth and
Environmental Science 415: 012028
Imai M, Horikawa Y, Kiyoto S, Imai T, *Sugiyama J (2020) Structural changes in sugarcane bagasse cellulose caused by enzymatic hydrolysis. J Wood Sci 66: 11
Yahya R, Yansen Y, Tazuru-Mizuno S, Sugiyama J (2020) Effect of vessel diameter on variation of fiber morphology in Acacia mangium. IAWA J 41 On line.
篠原 昌寿, 五十田 博 (2020) オイルダンパーを付加した木質ラーメン構造の限界耐力計算に基づく制振設計法. 日本建築学会構造系論文集 85: 355-365
Kita Y, *Sugiyama J. Wood identification of two anatomically similar Cupressaceae species based on two-dimensional microfibril angle mapping. Holzforschung,
2020, https://doi.org/10.1515/hf-2020-0079
Sung Wook Hwang, Hiroshi Isoda, Takafumi Nakagawa, *Junji Sugiyama. Flexural anisotropy of rift-sawn softwood boards induced by the end-grain orientation. J Wood
Sci 67, 14, 2021, https://doi.org/10.1186/ s10086-021-01946-y
*杉山淳司、樹皮ウオッチングのすすめ、生存圏研究、No.17, 1-7, 2020
"五十田博、中川貴文、木質材料の構造力学的最適化による環境応答戦略の理解 その 1 準備研究と短期的な研究課題、日本建築学会学術講演梗概集、構造Ⅲ (651-652)"
川口班
川口健一, 出村拓 (2020) なぜ今、植物学と建築学が協働するのか? 建築雑誌 135: 6(査読無)
有本清香, 川口健一, 中楚洋介, 檜垣匠, 出村拓, 堀口翔太 (2020) 植物の葉表皮細胞のジグソーパターンの木造継ぎ手への直接的応用に関する基礎的研究. 生産研究 Vol.72 No.3(掲載決定)
*川口 健一,中楚 洋介,出村 拓 (2020) 植物構造オプト:植物の力学的最適化戦略に基づくサステナブル構造システムの基盤創成と力学的アナロジーに学ぶ巨大建築構造システム設計に関する基礎的考察,日本建築学会大会学術講演梗概集 構造Ⅰ: 657~660 (選抜梗概).
*中楚 洋介,川口 健一,藤原 徹,山崎 清志,Marcel Beier (2020) 栄養屈性を利用した根系構造の形態創生に関する基礎的研究 その1:2次元におけるイネ根の栄養屈性挙動の観察と生長シミュレーション,日本建築学会大会学術講演梗概集 構造Ⅰ: 701~704 (選抜梗概).
*有本 清香,川口 健一,中楚 洋介,出村 拓 (2020) 植物の重力屈性挙動の観察と力学的特性に関する基礎的考察 その2:豆苗の重力屈性挙動における力学的特性,日本建築学会大会学術講演梗概集 構造Ⅰ: 685~688 (選抜梗概).
*武藤 宝,川口 健一,中楚 洋介,張 天昊 (2020) ユーカリが伸長時に発揮する力の測定と建築構造への利用法の提案に関する基礎的研究,日本建築学会大会学術講演梗概集 構造Ⅰ: 689~692 (選抜梗概).
*小御門 真伍,川口 健一,中楚 洋介,細見 亮太,石塚 広一,張 天昊,出村 拓 (2020) 植物の力学的最適化戦略に学ぶサステナブル建築構造システムにおける巨大建築設計手法の導出と数値解析 その 2 分裂する細胞とプリミティブな成長ルールが生成する成長パターンの簡単な解析,日本建築学会大会学術講演梗概集 構造Ⅰ:
693~696 (選抜梗概).
*堀口 翔太,川口 健一,有本 清香,中楚 洋介,桧垣 匠,出村 拓 (2020) 植物の葉細胞にみられるジグソーパターンの継ぎ手への直接的応用と在来継ぎ手形状との比較,日本建築学会大会学術講演梗概集 構造Ⅰ: 715~716.
*Nakaso, Y.,Arimoto, S., Kawaguchi, K., Muto, T., Ueda, H. (2020) Mechanical measurement of gravitropic bending force in pea sprouts,Plant Biotechnol Vol.37
No.4: 475~480.
*Nakai, R., Azuma, T., Nakaso, Y., Sawa, S., Demura, T. (2020) Development of a dynamic imaging method for gravitropism in pea sprouts using clinical magnetic resonance imaging
system,Plant Biotechnol Vol.37 No.4: 437~442.
中楚 洋介 (2020) 生きた木で建築を-科学と工学の融合,建築雑誌 Vol.135 No.1738: 12-13.
張 天昊 (2021) 「シェル・空間構造」セミナー2020 植物の力学的最適化戦略に基づく構造システムの探索:植物構造オプト 活動レポート,建築雑誌 Vol.136 No.1746: 41.
澤班
Nakagami, S., Saeki, K., Toda, K., Ishida, T., and *Sawa, S. (2020) The atypical E2F transcription factor DEL1 modulates growth–defense tradeoffs of host plants during root-knot nematode infection. Scientific Rep. 10. 8836.
Ishida T, Suzuki R, Nakagami S, Kuroha T, Sakamoto S, Nakata MT, Yokoyama R, Kumura S, Mitsuda N, Nishitani K, Sawa S (2020) Root-knot nematodes modulate cell walls during root-knot formation in Arabidopsis roots. J Plant Res 133: 419-428 https://doi.org/10.1007/s10265-020-01186-z
Fukuda, M., Mieda, M., Sato, R., Kinoshita, S., Tomoyama, T., Ferjani, A., *Maeshima, M., *Segami, S. (2020) Lack of vacuolar H+-pyrophosphatase and cytosolic pyrophosphatases causes fatal developmental defects in Arabidopsis thaliana. Front. Plant Sci. 11:655.
Furumizu, C., Krabberød, A. K., Hammerstad, M., Alling, R. M., Wildhagen, M., Sawa S, *Aalen R. B. (2020) The Sequenced Genomes of Non-Seed Land Plants Reveal the (R)Evolutionary History of Peptide Signaling. bioRxiv 2020.06.02.130120
"Suzuki, R., Ueda, T., Wada, T., Ito, M., and *Sawa, S. (2020) Identification of genes involved in Meloidogyne incognita-induced gall formation processes in Arabidopsis thaliana. Plant Biotech. In Press.
"Tsai, A, Y-L., Oota, M., and Sawa, S. (2020) Chemotactic host-finding strategies of plant endoparasites and endophytes. Frontiers in Plant Science
Hirakawa, Y., Fujimoto, T., Ishida, S., Uchida, N., Sawa, S., Kiyosue, T., Ishizaki, K., Nishihama, R., Kohchi, T., and *Bowman, J.L., (2020). Induction of multichotomous branching by CLAVATA peptide in Marchantia polymorpha. Curr. Biol. 30, 3833-3840.
Yuan, N., Furumizu, C., Zhang, B., and *Sawa, S. (2020) Database mining of plant peptide homologues. Plant Biotech. In Press.
岡本竜弥、相田光宏、石川勇人、*澤進一郎 (2020) 熊本におけるアイラトビカズラ(マメ科)のDNAシーケンスによる種同定, Botany, 70, 8-10.
"Yoshida, Y., Arita, T,. Otani, J., and *Sawa, S. (2020) Visualization of Toyoura sand-grown plant roots by X-ray computer tomography. Plant Biotech. 37. 481-484.
"Toyoda, S., Oota, M., Ishiakwa, H., and *Sawa, S. (2020) Calcium sulfate and calcium carbonate as root-knot-nematode attractants and possible trap materials to protect crop plants. Plant Biotech. In Press.
"*Nakai, R., Azuma, T., Nakaso, Y., Sawa, S., and Demura, T. (2020) Development of a dynamic imaging method for gravitropism in pea sprouts using clinical magnetic resonance imaging system. Plant Biotech. 37. 437-442.
*肥田 博隆 江原 りか 神野 伊策 古水 千尋 澤 進一郎 (2020) 機械的ストレスが植物寄生性線虫の感染に与える影響の解析 電気学会総合研究会 BMS-20-20.
Furumizu, C., and *Sawa, S. (2020) Insight into early diversification of leucine-rich repeat receptor-like kinases provided by the sequenced moss and hornwort genomes. Plant Mol. Biol. In Press.
*Sawa, S., Sato, M. H., and Favery, B. (2020). Developmental Modification under Biotic Interactions in Plants. Frontiers in Plant Science. In Press
*Suetsugu K., Kaida, S., Fukunaga, H., and Sawa, S. (2020). A New Form of the Mycoheterotrophic Plant Lecanorchis japonica (Orchidaceae) from Japan. Acta Phytotaxonomica et Geobotanica 71, 243-248.
"Fukunaga, H., Kitada, Y., Kawamura, N., and *Sawa, S. (2021) A New form of the Mycoheterotrophic Plant Lecanorchis nigricans var. patipetala (Orchidaceae) from Tokyo, Japan. Orchid Digest, In Press.
"Asaoka, M,. Ooe, M., Gunji, S., Milani, P., Runel, G., Horiguchi, G., Hamant, O., Sawa, S., Tsukaya, H., and *Ferjani, A. (2021) Stem integrity in Arabidopsis thaliana requires a load-bearing epidermis. Development, In Press.
"Imoto, A., Yamada, M., Sakamoto, T., Okuyama, A., Ishida, T., Sawa, S., and *Aida, M. A. (2021) A ClearSee-based clearing protocol for 3D visualization of Arabidopsis tahaliana embryos. Plants. In Press.
"Tojo, H., Nakamura, A., Ferjani, A., Kazama, Y., Abe, T., *Iida, H. (2021) A Method Enabling Comprehensive Isolation of Arabidopsis Mutants Exhibiting Unusual Root Mechanical
Behavior. Front. Plant Sci. (In press)"
森田班
Kawamoto, N., Kanbe, Y., Nakamura, M., Mori, A., *Morita, M.T. (2020) Gravity-sensing tissues for gravitropism are required for “anti-gravitropic” phenotypes of lzy multiple mutants in Arabidopsis. Plants, 9: 615.
*Shindo M., Makigawa, S., Kodama, K., Matsumoto, K., Iwata, T., Wasano, N., Kano, A., Morita, M.T., Fujii, Y. (2020) Design and chemical synthesis of root gravitropism
inhibitors: Bridged analogues of ku-76 have more potent activity. Phytochemistry, 179: 112508.
*Tsugawa, S., Sano, T.G., Shima, H., Morita, M.T., Demura T. (2020) Model-based study of shoot gravitropism: mechanics perspective. Quantitative Plant Biology,
1: e4.
Abe, Y., Meguriya, K., Matsuzaki, T., Sugiyama, T., Yoshikawa, H.Y., Morita, M.T., *Toyota, M. (2020) Micromanipulation of the plant organelle amyloplast by optical tweezers.
Plant Biotechnology, 37: 405-415.
藤原班
Feng ZH, Nagao H, Li B, Sotta N, Shikanai Y, Yamaguchi K, Shigenobu S, Kamiya T, Fujiwara T (2020) MRS2-7 splicing requires SMU1 and SMU2, whose complex formation promotes their intranuclear compartmentation. Plant Physiol in press
中楚洋介, 川口健一, 藤原徹, 山﨑清志, Marcel BEIER (2020) 栄養屈性を利用した根系構造の形態創生に関する基礎的研究 その1:2次元におけるイネ根の栄養屈性挙動の観察と生長シミュレーション.日本建築学会大会学術講演梗概集(構造I)「オーガナイズドセッション:植物構造オプト」. 4pp. (掲載決定)(選抜梗概)
Marcel Pascal Beier, Satoru Tsugawa, Taku Demura, Toru Fujiwara* (2020) Root shape adaptation to mechanical stress derived from unidirectional vibrations in Populus nigra. Plant Biotechnology 37(4) 423 - 428
Akira Yoshinari, Takuya Hosokawa, Marcel Pascal Beier, Keishi Oshima, Yuka Ogino, Chiaki Hori, Taichi E Takasuka, Yoichiro Fukao, Toru Fujiwara, Junpei Takano* (2020) Transport-coupled ubiquitination of the borate transporter BOR1 for its boron-dependent degradation. The Plant Cell
Qing Wang Wenna Zhang Hua Xiao Naoyuki Sotta Marcel P. Beier Junpei Takano Kyoko Miwa Lihong Gao Toru Fujiwara* (2020) Involvement of boron transporter BOR1 in growth under low boron and high nitrate conditions in Arabidopsis thaliana. Physiologia Plantarum
Soichi Kojima, Keiki Ishiyama, Marcel Pascal Beier, Toshihiko Hayakawa* (2020) Ammonium Assimilation and Metabolism in Rice. Progress in Botany Vol. 82 pp
211-231
豊田班
Hagihara T, *Toyota M (2020) Mechanical Signaling in the Sensitive Plant Mimosa pudica L. Plants 9: 587
豊田正嗣. 植物が傷つけられたことを感じて,全身に情報を伝える仕組み グルタミン酸の新しい機能. (2020) 化学と生物 58 (2): 70-72
桧垣班
Tanaka M, Fujii Y, Hirano K, Higaki T, Nagasaki A, Ishikawa R, Okajima T, *Katoh K (2019) Fascin in lamellipodia contributes to cell elasticity by controlling the orientation of filamentous actin. Genes Cells 24: 202-213
*Higaki T, Akita K, Hasezawa S (2020) Elevated CO2 promotes satellite stomata production in young cotyledons of Arabidopsis thaliana. Genes Cells in press.
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